Collisions:
- auto-gdal through gdal, gmt, grass, ncl, paraview, qgis
- auto-hdf5 through adios, camitk, cdo, gdal, gnudatalanguage, grads, labplot, lammps, libminc, ncl, netcdf, paraview, qgis, vtk9
- auto-icu through camitk
- auto-libxml2 through camitk, cdo, gdal, netcdf, paraview, pymol, qgis, vtk9
- auto-pnetcdf through lammps
- auto-protobuf through qgis
- auto-qwt through qgis
- numpy2 through cmor, gdal, gnudatalanguage, grass, netcdf4-python, pyferret, pymol
- python3.13-add through cmor, gdal, lammps, magics++, metview, netcdf4-python, paraview, pyferret, pymol, v-sim