Version in base suite: 2.22.0+ds-2 Base version: r-bioc-beachmat_2.22.0+ds-2 Target version: r-bioc-beachmat_2.22.0+ds-3~deb13u1 Base file: /srv/ftp-master.debian.org/ftp/pool/main/r/r-bioc-beachmat/r-bioc-beachmat_2.22.0+ds-2.dsc Target file: /srv/ftp-master.debian.org/policy/pool/main/r/r-bioc-beachmat/r-bioc-beachmat_2.22.0+ds-3~deb13u1.dsc changelog | 10 ++++++++++ patches/series | 1 + patches/skip-missing-beachmat.hdf5 | 15 +++++++++++++++ 3 files changed, 26 insertions(+) Unrecognised file line in .dsc: -----BEGIN PGP SIGNATURE----- diff -Nru r-bioc-beachmat-2.22.0+ds/debian/changelog r-bioc-beachmat-2.22.0+ds/debian/changelog --- r-bioc-beachmat-2.22.0+ds/debian/changelog 2025-01-12 20:38:05.000000000 +0000 +++ r-bioc-beachmat-2.22.0+ds/debian/changelog 2025-09-14 07:38:29.000000000 +0000 @@ -1,3 +1,13 @@ +r-bioc-beachmat (2.22.0+ds-3~deb13u1) trixie; urgency=medium + + * Team upload. + + [ Michael R. Crusoe ] + * Patch up part of a test that depends on the "beachmat.hdf5" R + package, which is not yet in Debian. Closes: #1111758 + + -- Charles Plessy Sun, 14 Sep 2025 16:38:29 +0900 + r-bioc-beachmat (2.22.0+ds-2) unstable; urgency=medium * Team upload. diff -Nru r-bioc-beachmat-2.22.0+ds/debian/patches/series r-bioc-beachmat-2.22.0+ds/debian/patches/series --- r-bioc-beachmat-2.22.0+ds/debian/patches/series 1970-01-01 00:00:00.000000000 +0000 +++ r-bioc-beachmat-2.22.0+ds/debian/patches/series 2025-09-14 07:31:19.000000000 +0000 @@ -0,0 +1 @@ +skip-missing-beachmat.hdf5 diff -Nru r-bioc-beachmat-2.22.0+ds/debian/patches/skip-missing-beachmat.hdf5 r-bioc-beachmat-2.22.0+ds/debian/patches/skip-missing-beachmat.hdf5 --- r-bioc-beachmat-2.22.0+ds/debian/patches/skip-missing-beachmat.hdf5 1970-01-01 00:00:00.000000000 +0000 +++ r-bioc-beachmat-2.22.0+ds/debian/patches/skip-missing-beachmat.hdf5 2025-09-14 07:31:19.000000000 +0000 @@ -0,0 +1,15 @@ +Author: Michael R. Crusoe +Description: skip part of a test that depends on the unpackaged beachmat.hdf5 +Forwarded: not-needed +--- r-bioc-beachmat.orig/tests/testthat/test-initializeCpp-other.R ++++ r-bioc-beachmat/tests/testthat/test-initializeCpp-other.R +@@ -150,9 +150,6 @@ + + ptr <- initializeCpp(mat2) + am_i_ok(mat, ptr) +- +- # Package is automatically loaded to expose the specialized methods. +- expect_true(isNamespaceLoaded("beachmat.hdf5")) + }) + + test_that("initialization works correctly with an unknown DelayedArray", {